Completed Puzzles Puzzle PZ22 Results
Description
Hatchet Ribozyme
RNA sequence (5' to 3')
UUACUGUGAGAAUCAGUAACAAACAUGUGGGGCUUAUAU CUAAUCGAAAGAUUAGUAUUAGUGCAGAC GUUAAAACCAUGUC
Experimental structure(s)
59rlnvq3AKRU1qtg9TEtMWOLYrmkmeUM-solutionPZ22.pdb
References

L. Zheng, C. Falschlunger, K. Huang, E. Mairhofer, S. Yuan, J. Wang, D. J. Patel, R. Micura and A. Ren (2019) Hatchet ribozyme structure and implications for cleavage mechanism. Proc Natl Acad Sci U S A., 116(22): 10783-10791

PDB ID:
6jq5
Opening date:
19 Nov 2018, 22:24
Closing date (Human category):
17 Dec 2018, 23:24
Closing date (Webserver category):
21 Nov 2018, 23:24

Display:
Hide or show column:

# Group (User) Model(s) Category Clashscore
DI
INF all
INF nwc
INF stacking
INF wc
MCQ
P-Value
RMSD
Details
1 Das Group (Das ) 5 Human 3.800 16.592 0.653 0.000 0.626 0.898 16.650 0.000 10.843
2 Das Group (Das ) 1 Human 4.940 17.568 0.653 0.000 0.652 0.847 17.320 0.000 11.480
3 Das Group (Das ) 2 Human 6.090 19.767 0.650 0.000 0.641 0.854 17.510 0.000 12.851
4 Das Group (Das ) 8 Human 6.470 22.236 0.647 0.000 0.631 0.891 17.290 0.000 14.383
5 Xiao Group (Xiao ) 1 Human 10.270 22.251 0.652 0.348 0.620 0.849 35.520 0.000 14.501
6 Szachniuk Group (formerly: Adamiak Group) (Adamiak ) 5 Human 5.330 23.661 0.658 0.123 0.652 0.847 20.850 0.000 15.558
7 Xiao Group (Xiao ) 2 Human 9.510 27.441 0.626 0.213 0.643 0.707 32.430 0.000 17.173
8 Das Group (Das ) 9 Human 3.800 27.896 0.627 0.000 0.641 0.794 16.560 0.000 17.489
9 Bujnicki Group (Bujnicki ) 2 Human 36.150 26.935 0.667 0.000 0.667 0.847 25.610 0.000 17.959
10 Szachniuk Group (formerly: Adamiak Group) (Adamiak ) 4 Human 9.890 29.537 0.623 0.000 0.642 0.770 22.250 0.000 18.394
11 Xiao Group (Xiao ) 5 Human 2.280 27.722 0.679 0.213 0.689 0.786 35.740 0.000 18.826
12 Das Group (Das ) 6 Human 3.800 29.021 0.653 0.000 0.626 0.891 15.950 0.000 18.965
13 Szachniuk Group (formerly: Adamiak Group) (Adamiak ) 2 Human 9.890 31.198 0.630 0.213 0.663 0.667 22.230 0.000 19.653
14 Das Group (Das ) 10 Human 4.560 30.902 0.640 0.000 0.612 0.891 16.770 0.000 19.790
15 Dokholyan Group (Dokholyan ) 5 Human 1.900 35.563 0.580 0.000 0.592 0.776 24.160 0.001 20.609
16 Bujnicki Group (Bujnicki ) 1 Human 15.980 32.660 0.641 0.000 0.638 0.817 22.210 0.002 20.929
17 Das Group (Das ) 7 Human 2.280 32.051 0.660 0.000 0.621 0.928 17.760 0.003 21.158
18 Chen Group (Chen ) 5 Human 1.140 29.802 0.718 0.302 0.683 0.924 23.860 0.005 21.390
19 Xiao Group (Xiao ) 4 Human 0.380 33.524 0.693 0.174 0.687 0.872 33.360 0.056 23.226
20 Bujnicki Group (Bujnicki ) 5 Server 115.380 37.156 0.643 0.000 0.652 0.770 24.280 0.113 23.906
21 Das Group (Das ) 3 Human 6.090 35.339 0.677 0.000 0.667 0.891 17.010 0.114 23.914
22 Xiao Group (Xiao ) 3 Human 3.040 42.241 0.579 0.000 0.581 0.734 27.640 0.185 24.468
23 Dokholyan Group (Dokholyan ) 3 Human 1.520 38.361 0.638 0.000 0.683 0.768 25.020 0.186 24.478
24 Dokholyan Group (Dokholyan ) 4 Human 1.900 41.917 0.594 0.000 0.631 0.720 23.770 0.259 24.918
25 Bujnicki Group (Bujnicki ) 3 Server 147.340 44.046 0.569 0.000 0.627 0.584 24.830 0.282 25.046
26 Bujnicki Group (Bujnicki ) 5 Human 69.360 42.801 0.585 0.000 0.647 0.594 23.900 0.284 25.055
27 Das Group (Das ) 4 Human 10.660 38.665 0.657 0.000 0.632 0.891 17.950 0.351 25.395
28 Chen Group (Chen ) 4 Human 2.280 35.603 0.720 0.213 0.693 0.924 26.920 0.403 25.640
29 Chen Group (Chen ) 2 Human 1.900 34.792 0.752 0.302 0.737 0.924 26.860 0.515 26.154
30 Bujnicki Group (Bujnicki ) 4 Server 116.620 49.410 0.533 0.000 0.541 0.667 24.800 0.554 26.327
31 Chen Group (Chen ) 1 Human 2.280 36.278 0.743 0.213 0.729 0.924 23.020 0.687 26.964
32 Bujnicki Group (Bujnicki ) 1 Server 157.390 50.641 0.548 0.174 0.563 0.617 24.010 0.824 27.760
33 Bujnicki Group (Bujnicki ) 3 Human 63.760 49.783 0.558 0.151 0.584 0.611 22.490 0.825 27.769
34 Szachniuk Group (formerly: Adamiak Group) (Adamiak ) 3 Human 6.470 46.453 0.601 0.174 0.674 0.549 22.250 0.848 27.938
35 Bujnicki Group (Bujnicki ) 4 Human 60.060 45.706 0.615 0.000 0.658 0.667 23.290 0.868 28.093
36 Bujnicki Group (Bujnicki ) 2 Server 125.520 47.341 0.593 0.000 0.648 0.631 24.540 0.868 28.096
37 Szachniuk Group (formerly: Adamiak Group) (Adamiak ) 1 Human 7.990 44.951 0.642 0.000 0.666 0.731 24.210 0.939 28.862
38 Dokholyan Group (Dokholyan ) 1 Human 5.710 49.068 0.598 0.000 0.646 0.725 24.300 0.965 29.345
39 Dokholyan Group (Dokholyan ) 2 Human 3.810 56.305 0.542 0.000 0.557 0.720 25.170 0.993 30.496
40 Chen Group (Chen ) 3 Human 1.520 43.570 0.729 0.213 0.708 0.924 25.840 0.999 31.762
Metric Webserver category Human category
Median Mean Median Mean
Clashscore 125.520 132.450 4.940 11.052
DI 47.341 45.719 33.524 34.233
INF all 0.569 0.577 0.647 0.645
INF nwc 0.000 0.035 0.000 0.081
INF stacking 0.627 0.606 0.646 0.649
INF wc 0.631 0.654 0.847 0.804
MCQ 24.540 24.492 23.290 23.248
P-Value 0.554 0.528 0.005 0.271
RMSD 26.327 26.227 21.390 21.898

Result visualization for different evaluation measures

Violin plot for Clashscore
Violin plot for DI
Violin plot for INF all
Violin plot for INF nwc
Violin plot for INF stacking
Violin plot for INF wc
Violin plot for MCQ
Violin plot for P-Value
Violin plot for RMSD