RNA-Puzzles

R. J. Trachman 3rd, A. Autour, S. C. Y. Jeng, A. Abdolahzadeh, A. Andreoni, R. Cojocaru, R. Garipov, E. V. Dolgosheina, J. R. Knutson, M. Ryckelynck, P. J. Unrau and A. R. Ferré-DAmaré (2019) Structure and functional reselection of the Mango-III fluorogenic RNA aptamer. Nature Chemical Biology, 15(5): 472-479

#	Group (User)	Model(s)	Category	Clashscore	DI	INF all	INF nwc	INF stacking	INF wc	MCQ	P-Value	RMSD
1	Das Group (Das )	7	Human	3.340	14.794	0.549	0.286	0.612	0.866	33.160	0.000	8.129
2	Das Group (Das )	6	Human	10.850	15.172	0.638	0.414	0.707	0.866	31.500	0.001	9.686
3	Chen Group (Chen )	3	Human	133.390	18.749	0.565	0.445	0.561	0.750	47.100	0.004	10.587
4	Das Group (Das )	8	Human	11.690	20.892	0.511	0.322	0.520	0.802	32.760	0.004	10.681
5	Xiao Group (Xiao )	1	Human	0.000	24.998	0.431	0.000	0.500	0.612	38.950	0.005	10.762
6	Xiao Group (Xiao )	3	Human	0.830	24.286	0.449	-	0.531	0.567	45.020	0.006	10.894
7	Xiao Group (Xiao )	2	Human	0.000	23.021	0.474	0.000	0.566	0.640	40.800	0.006	10.901
8	Bujnicki Group (Bujnicki )	3	Server	86.260	22.545	0.489	-	0.596	0.567	31.510	0.007	11.025
9	Bujnicki Group (Bujnicki )	1	Server	121.440	22.476	0.491	0.000	0.570	0.661	28.630	0.007	11.029
10	Das Group (Das )	1	Human	5.840	22.566	0.495	0.338	0.493	0.750	31.790	0.009	11.162
11	Ding Group (Ding )	1	Human	11.690	19.349	0.583	0.356	0.612	0.866	35.420	0.011	11.272
12	Chen Group (Chen )	1	Human	159.730	24.688	0.463	0.445	0.340	0.750	49.540	0.013	11.422
13	Bujnicki Group (Bujnicki )	4	Server	113.330	22.885	0.500	0.000	0.587	0.661	28.300	0.013	11.443
14	Ding Group (Ding )	3	Human	6.680	20.602	0.556	0.378	0.545	0.866	34.410	0.014	11.457
15	Bujnicki Group (Bujnicki )	5	Server	131.600	22.418	0.517	-	0.634	0.588	30.850	0.017	11.593
16	Bujnicki Group (Bujnicki )	2	Server	102.350	25.536	0.457	0.000	0.533	0.612	30.760	0.018	11.658
17	Ding Group (Ding )	2	Human	10.020	24.207	0.482	0.378	0.436	0.791	32.230	0.019	11.677
18	Das Group (Das )	9	Human	8.350	21.201	0.556	0.567	0.484	0.866	37.580	0.021	11.781
19	Bujnicki Group (Bujnicki )	3	Human	41.340	353.330	0.034	-	0.047	-	60.270	0.027	11.952
20	Das Group (Das )	4	Human	4.170	21.311	0.565	0.338	0.596	0.866	32.980	0.030	12.045
21	Das Group (Das )	5	Human	9.180	20.304	0.593	0.483	0.579	0.866	32.310	0.030	12.049
22	Bujnicki Group (Bujnicki )	1	Human	60.690	386.744	0.031	0.000	0.046	-	57.440	0.035	12.157
23	Bujnicki Group (Bujnicki )	2	Human	65.200	175.018	0.070	-	0.096	-	63.350	0.035	12.165
24	Das Group (Das )	10	Human	2.500	24.374	0.506	0.309	0.520	0.802	37.860	0.042	12.322
25	Dokholyan Group (Dokholyan )	1	Human	26.690	32.288	0.385	0.000	0.459	0.866	57.470	0.048	12.431
26	Das Group (Das )	3	Human	5.010	21.849	0.575	0.429	0.579	0.866	31.350	0.055	12.554
27	Ding Group (Ding )	4	Human	10.850	24.074	0.530	0.378	0.495	0.866	32.050	0.068	12.750
28	Das Group (Das )	2	Human	15.030	20.642	0.622	0.356	0.653	0.935	31.430	0.075	12.834
29	Chen Group (Chen )	2	Human	182.200	22.253	0.585	0.546	0.527	0.802	40.790	0.091	13.021
30	Szachniuk Group (formerly: Adamiak Group) (Adamiak )	1	Human	1.670	23.174	0.565	0.356	0.609	0.750	39.710	0.098	13.098
31	Szachniuk Group (formerly: Adamiak Group) (Adamiak )	2	Human	1.670	23.735	0.558	0.338	0.609	0.750	41.140	0.111	13.232
32	Ding Group (Ding )	5	Human	2.500	24.628	0.538	0.404	0.495	0.866	32.010	0.114	13.259
33	Szachniuk Group (formerly: Adamiak Group) (Adamiak )	3	Human	0.830	27.777	0.511	0.309	0.530	0.866	36.720	0.249	14.207
34	Xiao Group (Xiao )	5	Human	0.000	61.822	0.278	0.000	0.449	0.000	49.160	0.837	17.196
35	Xiao Group (Xiao )	4	Human	20.030	59.355	0.307	0.000	0.501	0.000	35.690	0.939	18.218

Group (User)

Model(s)

Metric	Webserver category		Human category
Metric	Median	Mean	Median	Mean
Clashscore	113.330	110.996	8.765	27.066
DI	22.545	23.172	23.455	53.240
INF all	0.491	0.491	0.521	0.467
INF nwc	0.000	0.000	0.338	0.273
INF stacking	0.587	0.584	0.524	0.490
INF wc	0.612	0.618	0.802	0.670
MCQ	30.760	30.010	37.150	40.066
P-Value	0.013	0.013	0.030	0.100
RMSD	11.443	11.350	12.047	12.197

Puzzle PZ23