Completed puzzles (34)
Puzzle PZ27
Description
tRNA complex (Bacillus subtilis glyQS)
RNA sequence (5' to 3')
GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGG GGTCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Experimental structure(s)
solutionPZ27.pdb
References

S. Li, Z. Su, J. Lehmann, V. Stamatopoulou, N. Giarimoglou, F. E. Henderson, L. Fan, G. D. Pintille, K. Zhang, M. Chen, S. J. Ludtke, Y. X. Wang, C. Stathopoulos, W. Chiu and J. Zhang (2019) Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions. Nature Structural & Molecular Biology, 26(12): 1094-1105

PDB ID:
6pom
Opening date:
21 Oct 2019, 23:24
Closing date (Human category):
11 Nov 2019, 23:24
Closing date (Webserver category):
23 Oct 2019, 23:24
Puzzle PZ26tBox
Description
T-box riboswitch (Geobacillus kaustophilus glyQ)
RNA sequence (5' to 3')
GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGG GGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Experimental structure(s)
solutionPZ26tBox.pdb
References

S. Li, Z. Su, J. Lehmann, V. Stamatopoulou, N. Giarimoglou, F. E. Henderson, L. Fan, G. D. Pintille, K. Zhang, M. Chen, S. J. Ludtke, Y. X. Wang, C. Stathopoulos, W. Chiu and J. Zhang (2019) Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions. Nature Structural & Molecular Biology, 26(12): 1094-1105

PDB ID:
6pmo
Opening date:
21 Oct 2019, 22:24
Closing date (Human category):
11 Nov 2019, 23:24
Closing date (Webserver category):
23 Oct 2019, 23:24
Puzzle PZ26
Description
tRNA complex (Geobacillus kaustophilus glyQ)
RNA sequence (5' to 3')
GAAAGUGGGUGCGCGUUUGGCGCAUCAACUCGGGUGGAACCG CGGGAGCUACGCUCUCGUCCCGAG
Experimental structure(s)
solutionPZ26.pdb
References

S. Li, Z. Su, J. Lehmann, V. Stamatopoulou, N. Giarimoglou, F. E. Henderson, L. Fan, G. D. Pintille, K. Zhang, M. Chen, S. J. Ludtke, Y. X. Wang, C. Stathopoulos, W. Chiu and J. Zhang (2019) Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions. Nature Structural & Molecular Biology, 26(12): 1094-1105

PDB ID:
6pmo
Opening date:
21 Oct 2019, 22:24
Closing date (Human category):
11 Nov 2019, 23:24
Closing date (Webserver category):
23 Oct 2019, 23:24
Puzzle PZ25
Description
2-dG-II riboswitch
RNA sequence (5' to 3')
GGGUGUAAUCUCCAAAAUAUGGUUGGGGAGCCUCCACCAGUGAA CCGUAAAAUCGCUGUCACCACCCAG
Experimental structure(s)
solutionPZ25.pdb
References

M. M. Matyjasik and R.T. Batey (2019) Structural basis for 2-deoxyguanosine recognition by the 2-dG-II class of riboswitches. Nucleic Acids Research, 47(20): 10931-10941

PDB ID:
6p2h
Opening date:
29 Jul 2019, 23:24
Closing date (Human category):
23 Aug 2019, 23:24
Closing date (Webserver category):
31 Jul 2019, 23:24
Puzzle PZ24
Description
adenovirus virus-associated RNA
RNA sequence (5' to 3')
GGACCUCGCAAGGGUAUCAUGGCGGACGACCGGGGUUCGAACCCCGGAUC CGGCCGUCCGCCGUGAUCCAUGCGGUUACCGCCCGCGUGUCGAACCCAGG UGUGCGAGGUCC
Experimental structure(s)
solutionPZ24.pdb
References

I. V. Hood, J. M. Gordon, C. Bou-Nader, F. E. Henderson, S. Bahmanjah and J. Zhang (2019) Crystal structure of an adenovirus virus-associated RNA. Nature Communications, 10, 2871

PDB ID:
6ol3
Opening date:
20 May 2019, 23:24
Closing date (Human category):
10 Jun 2019, 23:24
Closing date (Webserver category):
22 May 2019, 23:24